Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL31450.1 | EFL33388.1 | SSQG_01968 | SSQG_03906 | Glutamate synthase large subunit. | tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.583 |
EFL31450.1 | EFL33818.1 | SSQG_01968 | SSQG_04336 | Glutamate synthase large subunit. | Metal dependent phosphohydrolase. | 0.526 |
EFL31450.1 | ribBA | SSQG_01968 | SSQG_01319 | Glutamate synthase large subunit. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.443 |
EFL33388.1 | EFL31450.1 | SSQG_03906 | SSQG_01968 | tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Glutamate synthase large subunit. | 0.583 |
EFL33388.1 | EFL33818.1 | SSQG_03906 | SSQG_04336 | tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Metal dependent phosphohydrolase. | 0.486 |
EFL33388.1 | pnp | SSQG_03906 | SSQG_05768 | tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.912 |
EFL33816.1 | EFL33818.1 | SSQG_04334 | SSQG_04336 | Helix-turn-helix domain-containing protein. | Metal dependent phosphohydrolase. | 0.744 |
EFL33818.1 | EFL31450.1 | SSQG_04336 | SSQG_01968 | Metal dependent phosphohydrolase. | Glutamate synthase large subunit. | 0.526 |
EFL33818.1 | EFL33388.1 | SSQG_04336 | SSQG_03906 | Metal dependent phosphohydrolase. | tRNA adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.486 |
EFL33818.1 | EFL33816.1 | SSQG_04336 | SSQG_04334 | Metal dependent phosphohydrolase. | Helix-turn-helix domain-containing protein. | 0.744 |
EFL33818.1 | EFL33819.1 | SSQG_04336 | SSQG_04337 | Metal dependent phosphohydrolase. | Putative transcriptional regulator. | 0.873 |
EFL33818.1 | EFL35540.1 | SSQG_04336 | SSQG_06058 | Metal dependent phosphohydrolase. | ATPase. | 0.469 |
EFL33818.1 | EFL35561.1 | SSQG_04336 | SSQG_06079 | Metal dependent phosphohydrolase. | Type II restriction enzyme. | 0.440 |
EFL33818.1 | folE | SSQG_04336 | SSQG_04400 | Metal dependent phosphohydrolase. | GTP cyclohydrolase I. | 0.456 |
EFL33818.1 | ndk | SSQG_04336 | SSQG_02632 | Metal dependent phosphohydrolase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.452 |
EFL33818.1 | pnp | SSQG_04336 | SSQG_05768 | Metal dependent phosphohydrolase. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.494 |
EFL33818.1 | ribBA | SSQG_04336 | SSQG_01319 | Metal dependent phosphohydrolase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.758 |
EFL33819.1 | EFL33818.1 | SSQG_04337 | SSQG_04336 | Putative transcriptional regulator. | Metal dependent phosphohydrolase. | 0.873 |
EFL35540.1 | EFL33818.1 | SSQG_06058 | SSQG_04336 | ATPase. | Metal dependent phosphohydrolase. | 0.469 |
EFL35540.1 | EFL35561.1 | SSQG_06058 | SSQG_06079 | ATPase. | Type II restriction enzyme. | 0.776 |
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