STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL34163.1Predicted protein. (650 aa)    
Predicted Functional Partners:
EFL34162.1
Conserved hypothetical protein.
 
 0.938
EFL34165.1
Predicted protein; Belongs to the glycosyl hydrolase 26 family.
 
  
  0.932
EFL34164.1
Predicted protein.
       0.876
EFL35264.1
Two-component system sensor kinase.
  
 
 0.831
EFL31103.1
Succinoglycan biosynthesis protein.
  
 0.828
EFL30297.1
Glycosyl transferase family 2 protein.
  
 
 0.825
EFL34161.1
Conserved hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
   
 0.800
EFL31648.1
Pullulanase.
    
 0.771
EFL31102.1
Glycosyltransferase.
 
  
 0.755
EFL35066.1
WD40 domain-containing protein beta Propeller.
  
 
 0.747
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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