STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL34450.1Sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family. (375 aa)    
Predicted Functional Partners:
EFL34449.1
D-xylose ABC transporter, ATP-binding protein.
 
 
 0.999
EFL34451.1
Sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
EFL34448.1
Lipoprotein.
 
 
 0.986
EFL34447.1
Lipoprotein.
 
 
 0.982
EFL34452.1
Cytidine deaminase.
 
  
 0.924
EFL34453.1
Thymidine phosphorylase.
 
   
 0.832
EFL36396.1
D-xylose ABC transporter, ATP-binding protein.
 
  
  0.726
EFL30118.1
D-xylose ABC transporter, ATP-binding protein.
 
  
  0.671
EFL30331.1
D-xylose ABC transporter, ATP-binding protein.
 
  
  0.658
EFL30454.1
Ribose ABC transporter.
 
  
  0.653
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.