STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL34513.1ATPase central domain-containing protein. (428 aa)    
Predicted Functional Partners:
EFL35198.1
Conserved hypothetical protein.
   
 
 0.894
EFL36440.1
NB-ARC domain-containing protein.
  
 0.894
EFL33938.1
Acetoin dehydrogenase.
   
 0.864
prcA
20S proteasome alpha-subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
   
 0.840
prcB
Proteasome endopeptidase complex, archaeal, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.
   
 0.840
EFL33800.1
DNA polymerase III subunit delta'.
   
  0.825
alc
Allantoicase; Belongs to the allantoicase family.
   
 
  0.786
EFL32442.1
Mov34/MPN/PAD-1 family protein.
   
 0.783
EFL29656.1
Conserved hypothetical protein.
   
 0.778
EFL34731.1
Sel1 domain-containing protein repeat-containing protein.
   
 0.778
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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