STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL34593.1Predicted protein. (103 aa)    
Predicted Functional Partners:
EFL34594.1
Integral membrane protein.
 
  
 0.987
EFL32371.1
Conserved hypothetical protein.
 
  
 0.947
EFL34590.1
Integral membrane protein.
       0.593
EFL31176.1
Secreted protein.
  
  
 0.555
EFL35632.1
Membrane protease.
  
  
 0.555
EFL34591.1
Lipoprotein releasing system, ATP-binding protein.
       0.548
EFL34592.1
PadR-family transcriptional regulator.
       0.548
EFL34595.1
Penicillin-binding protein.
       0.509
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.