STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL34914.1LAO/AO transport system ATPase. (319 aa)    
Predicted Functional Partners:
EFL35808.1
methylmalonyl-CoA mutase, small subunit; Overlaps another CDS with the same product name.
  
 0.996
EFL34433.1
methylmalonyl-CoA mutase.
  
 0.992
EFL34938.1
isobutyryl-CoA mutase A.
  
 0.992
EFL35946.1
Coenzyme B12-dependent mutase.
  
 0.984
EFL35809.1
methylmalonyl-CoA mutase, small subunit; Overlaps another CDS with the same product name.
 
  
 0.966
EFL34357.1
Isobutyryl CoA mutase.
  
 0.943
EFL34912.1
methylmalonyl-CoA epimerase.
 
     0.930
EFL34913.1
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.816
EFL34911.1
Large Ala/Glu-rich protein.
       0.647
EFL34910.1
Cellulose-binding protein.
       0.615
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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