STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL35331.1Conserved hypothetical protein. (579 aa)    
Predicted Functional Partners:
EFL35330.1
ATP-dependent DNA helicase.
       0.773
EFL33648.1
Integral membrane protein.
  
     0.741
EFL35334.1
ABC transporter ATP-binding protein.
 
     0.724
EFL34911.1
Large Ala/Glu-rich protein.
  
     0.719
EFL33923.1
Alanine-rich protein; Truncated CDS.
  
     0.718
EFL35481.1
bldA-regulated nucleotide binding protein.
  
     0.718
EFL30845.1
Secreted protein.
  
     0.716
EFL31126.1
Integral membrane protein.
  
     0.712
EFL35263.1
Regulatory protein; Truncated CDS.
  
     0.712
EFL33306.1
Conserved hypothetical protein.
  
     0.708
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.