Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL33249.1 | EFL33919.1 | SSQG_03767 | SSQG_04436 | HhH-GPD family protein. | A/G-specific adenine glycosylase. | 0.517 |
| EFL33249.1 | EFL35892.1 | SSQG_03767 | SSQG_06410 | HhH-GPD family protein. | Exodeoxyribonuclease III. | 0.943 |
| EFL33249.1 | nfo | SSQG_03767 | SSQG_02055 | HhH-GPD family protein. | Endonuclease; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.760 |
| EFL33249.1 | polA | SSQG_03767 | SSQG_01943 | HhH-GPD family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.621 |
| EFL33407.1 | EFL33919.1 | SSQG_03925 | SSQG_04436 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase. | 0.736 |
| EFL33407.1 | EFL35892.1 | SSQG_03925 | SSQG_06410 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III. | 0.951 |
| EFL33407.1 | polA | SSQG_03925 | SSQG_01943 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.998 |
| EFL33919.1 | EFL33249.1 | SSQG_04436 | SSQG_03767 | A/G-specific adenine glycosylase. | HhH-GPD family protein. | 0.517 |
| EFL33919.1 | EFL33407.1 | SSQG_04436 | SSQG_03925 | A/G-specific adenine glycosylase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.736 |
| EFL33919.1 | EFL35781.1 | SSQG_04436 | SSQG_06299 | A/G-specific adenine glycosylase. | methylated-DNA-protein-cysteine methyltransferase. | 0.457 |
| EFL33919.1 | EFL35892.1 | SSQG_04436 | SSQG_06410 | A/G-specific adenine glycosylase. | Exodeoxyribonuclease III. | 0.959 |
| EFL33919.1 | EFL35934.1 | SSQG_04436 | SSQG_06452 | A/G-specific adenine glycosylase. | ADA-like regulatory protein; Unextendable partial coding region. | 0.527 |
| EFL33919.1 | EFL36290.1 | SSQG_04436 | SSQG_06808 | A/G-specific adenine glycosylase. | Conserved hypothetical protein. | 0.550 |
| EFL33919.1 | EFL36549.1 | SSQG_04436 | SSQG_07066 | A/G-specific adenine glycosylase. | Conserved hypothetical protein. | 0.742 |
| EFL33919.1 | nth | SSQG_04436 | SSQG_04289 | A/G-specific adenine glycosylase. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.758 |
| EFL33919.1 | polA | SSQG_04436 | SSQG_01943 | A/G-specific adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.496 |
| EFL35781.1 | EFL33919.1 | SSQG_06299 | SSQG_04436 | methylated-DNA-protein-cysteine methyltransferase. | A/G-specific adenine glycosylase. | 0.457 |
| EFL35781.1 | EFL35892.1 | SSQG_06299 | SSQG_06410 | methylated-DNA-protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.921 |
| EFL35781.1 | EFL35934.1 | SSQG_06299 | SSQG_06452 | methylated-DNA-protein-cysteine methyltransferase. | ADA-like regulatory protein; Unextendable partial coding region. | 0.860 |
| EFL35781.1 | EFL36290.1 | SSQG_06299 | SSQG_06808 | methylated-DNA-protein-cysteine methyltransferase. | Conserved hypothetical protein. | 0.422 |
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