STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL36064.1Conserved hypothetical protein. (128 aa)    
Predicted Functional Partners:
EFL36063.1
LC7 family protein.
 
     0.954
EFL36065.1
ATP/GTP-binding protein.
 
  
 0.940
EFL36062.1
Membrane protein.
 
 
 0.900
EFL36066.1
Conserved hypothetical protein.
 
   
 0.845
EFL36259.1
Membrane protein.
 
 
 0.784
EFL30423.1
Polyketide synthase subunit.
  
 0.780
EFL30260.1
Electron transfer flavoprotein.
  
 
 0.773
EFL30261.1
Electron transfer flavoprotein.
  
 
 0.764
EFL30991.1
Integral membrane protein; Truncated CDS; unextendable partial coding region.
 
     0.764
EFL35657.1
Large secreted protein.
 
     0.761
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.