STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL36287.1Imidazolonepropionase. (453 aa)    
Predicted Functional Partners:
EFL35838.1
Hydroxydechloroatrazine ethylaminohydrolase.
  
  
 
0.898
EFL32759.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
    
 0.892
EFL36288.1
Cupin 2 domain-containing protein.
       0.876
EFL36289.1
Short-chain dehydrogenase/reductase SDR.
       0.876
EFL36284.1
Peptidase M24.
 
   0.854
EFL36286.1
Transketolase.
    
  0.838
EFL36285.1
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit.
    
  0.829
EFL36283.1
Transcriptional regulator.
       0.755
EFL30683.1
Conserved hypothetical protein.
   
  0.750
EFL32344.1
Conserved hypothetical protein.
   
  0.750
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.