STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL36442.1Conserved hypothetical protein. (703 aa)    
Predicted Functional Partners:
EFL36440.1
NB-ARC domain-containing protein.
 
     0.747
EFL29893.1
Radical SAM domain-containing protein.
  
     0.603
EFL36439.1
WD repeat-containing protein.
       0.602
EFL36441.1
Conserved hypothetical protein.
       0.596
EFL35440.1
Radical SAM domain-containing protein.
  
     0.566
EFL35438.1
Conserved hypothetical protein.
  
     0.542
EFL34903.1
Conserved hypothetical protein.
  
     0.524
EFL31901.1
Conserved hypothetical protein.
 
     0.496
EFL31903.1
Serine/threonine protein kinase.
 
     0.495
EFL35515.1
NB-ARC domain-containing protein.
 
     0.492
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.