STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL36456.1Arabinofuranosidase. (462 aa)    
Predicted Functional Partners:
EFL30333.1
Xylan 1,4-beta-xylosidase.
 
  0.794
EFL32009.1
Neuramidase.
  
 0.774
EFL36026.1
Neuraminidase.
  
 0.774
EFL36454.1
Conserved hypothetical protein.
       0.739
EFL33544.1
Conserved hypothetical protein.
  
    0.729
EFL30326.1
Pectin lyase fold/virulence factor.
  
     0.707
EFL35740.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.706
EFL31868.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
     0.659
EFL29967.1
Xylosidase/glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
     0.653
EFL30287.1
Esterase.
  
    0.649
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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