STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL36882.1Methyltransferase. (284 aa)    
Predicted Functional Partners:
EFL30478.1
Phenyloxazoline synthase mbtB.
    
 0.853
EFL29662.1
Aminotransferase.
    
 0.774
EFL36602.1
FAD dependent oxidoreductase; Belongs to the GcvT family.
  
  
 0.754
EFL30423.1
Polyketide synthase subunit.
   
 0.723
EFL36881.1
TetR family transcriptional regulator.
 
 
   0.694
EFL30539.1
Methyltransferase.
  
  
  0.553
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.524
EFL30437.1
Polyketide synthase type I.
   
 0.519
EFL30528.1
Phosphinothricin tripeptide synthetase III.
    
 0.519
EFL33833.1
Polyketide synthase I protein; Truncated CDS.
   
 0.519
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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