STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37078.1IS630 family transposase. (211 aa)    
Predicted Functional Partners:
EFL37077.1
IS630 family transposase.
     0.968
EFL37177.1
ATP/GTP-binding protein.
  
 
 0.753
EFL34970.1
Conserved hypothetical protein.
  
     0.722
EFL34002.1
Conserved hypothetical protein.
  
     0.679
EFL31582.1
Transposase.
    
   0.659
EFL31766.1
DNA (cytosine-5-)-methyltransferase; Truncated CDS.
    
   0.659
EFL35661.1
Cytochrome P450 monooxygenase.
  
     0.560
EFL33990.1
luxR-family transcriptional regulator.
  
     0.529
EFL32316.1
Predicted protein.
  
     0.494
EFL34969.1
Oxidoreductase.
  
     0.485
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.