STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37175.1Cupin 2 domain-containing protein. (145 aa)    
Predicted Functional Partners:
EFL37174.1
Predicted protein.
       0.773
EFL30128.1
Predicted protein.
  
    0.739
EFL35388.1
Secreted protein.
  
     0.713
EFL35514.1
Metallophosphoesterase.
  
     0.661
EFL35747.1
Glycoside hydrolase.
  
     0.642
EFL35989.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.554
EFL34541.1
Conserved hypothetical protein.
  
     0.544
EFL33532.1
Regulatory protein.
  
    0.530
EFL31281.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
 
   0.510
EFL34068.1
3-ketosteroid-delta-1-dehydrogenase.
  
    0.510
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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