STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_1540KEGG: sgr:SGR_1703 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (590 aa)    
Predicted Functional Partners:
Sfla_1539
GntR domain protein; KEGG: sgr:SGR_1702 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.737
Sfla_1541
PFAM: NUDIX hydrolase; KEGG: sgr:SGR_1704 putative DNA hydrolase.
       0.737
Sfla_3756
KEGG: sgr:SGR_4365 hypothetical protein.
  
     0.727
Sfla_5232
KEGG: sgr:SGR_5898 hypothetical protein.
  
     0.710
Sfla_1542
KEGG: sgr:SGR_1705 hypothetical protein.
 
     0.705
Sfla_2320
KEGG: sma:SAV_3320 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
  0.692
Sfla_4494
KEGG: sgr:SGR_5168 putative integral membrane protein.
  
    0.675
Sfla_1680
KEGG: sgr:SGR_1848 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
  0.670
Sfla_4410
KEGG: sgr:SGR_5096 hypothetical protein.
  
    0.658
Sfla_3755
KEGG: sgr:SGR_4364 hypothetical protein.
  
     0.646
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.