STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_1663KEGG: sgr:SGR_1831 chitinase II; PFAM: glycoside hydrolase family 18; Carbohydrate-binding CenC domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; chitinase II. (612 aa)    
Predicted Functional Partners:
Sfla_5444
Chitinase; PFAM: glycoside hydrolase family 18; KEGG: sgr:SGR_6104 putative chitinase; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
 0.926
Sfla_3368
Chitinase; PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: sgr:SGR_3400 chitinase C; SMART: Carbohydrate-binding family V/XII.
 
 
 0.884
Sfla_2201
Chitinase; PFAM: glycoside hydrolase family 18; KEGG: sgr:SGR_2458 putative chitinase; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
  
 0.881
Sfla_0377
Ricin B lectin; KEGG: sgr:SGR_6490 putative chitinase; PFAM: Ricin B lectin; SMART: Ricin B lectin.
 
 0.853
Sfla_1239
Chitin-binding domain 3 protein; KEGG: sma:SAV_2254 cellulose binding protein; PFAM: chitin-binding domain 3 protein; cellulose-binding family II; SMART: cellulose-binding family II.
 
  
 0.788
Sfla_1664
KEGG: sgr:SGR_1832 hypothetical protein.
       0.766
Sfla_6353
Chitin-binding domain 3 protein; KEGG: sgr:SGR_199 putative secreted cellulose-binding protein; PFAM: chitin-binding domain 3 protein; cellulose-binding family II; SMART: cellulose-binding family II.
 
  
 0.759
Sfla_5099
KEGG: sgr:SGR_5773 putative cellulose-binding protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: chitin-binding domain 3 protein.
 
  
 0.754
Sfla_1949
Glycoside hydrolase family 18; KEGG: sgr:SGR_2160 chitinase III; PFAM: glycoside hydrolase family 18; cellulose-binding family II; Fibronectin type III domain protein; SMART: chitinase II; cellulose-binding family II; Fibronectin type III domain protein.
 
0.712
Sfla_4066
PFAM: chitin-binding domain 3 protein; KEGG: sgr:SGR_4707 putative secreted chitin-binding protein.
 
  
 0.690
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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