STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_2138PFAM: Suppressor of fused domain; KEGG: sgr:SGR_2367 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Sfla_6312
KEGG: rop:ROP_56340 hypothetical protein.
  
     0.674
Sfla_4760
PFAM: ABC-2 type transporter; KEGG: sgr:SGR_5444 putative ABC transporter permease protein.
  
     0.660
Sfla_2752
KEGG: sgr:SGR_3183 hypothetical protein.
  
     0.598
Sfla_3781
Hypothetical protein; Manually curated; KEGG: sgr:SGR_4389 hypothetical protein.
  
     0.586
Sfla_2824
PFAM: DoxX family protein; KEGG: sgr:SGR_4021 putative integral membrane protein.
  
     0.584
Sfla_1169
Hypothetical protein; Manually curated; KEGG: sgr:SGR_1423 hypothetical protein.
  
     0.560
Sfla_2884
KEGG: sgr:SGR_3963 putative integral membrane protein.
  
     0.558
Sfla_4973
KEGG: scb:SCAB_70941 hypothetical protein.
  
     0.549
Sfla_3520
KEGG: sgr:SGR_4130 putative alanine-rich protein.
  
     0.533
Sfla_1390
KEGG: scb:SCAB_23261 hypothetical protein.
  
     0.519
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.