STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_4281Glutamine--scyllo-inositol transaminase; KEGG: sgr:SGR_4941 putative aspartate aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (372 aa)    
Predicted Functional Partners:
Sfla_4284
Nucleotide sugar dehydrogenase; KEGG: sgr:SGR_4944 putative UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.973
Sfla_4282
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sgr:SGR_4942 putative NAD-dependent dehydrogenase.
 
  
 0.969
Sfla_1352
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: sgr:SGR_1540 putative glycosyl transferase; PFAM: sugar transferase.
  
 0.931
Sfla_3330
PFAM: sugar transferase; KEGG: sgr:SGR_3435 putative sugar transferase.
 
  
 0.929
Sfla_4288
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: sgr:SGR_4948 putative UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.926
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.922
Sfla_5971
KEGG: sgr:SGR_519 putative sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
 0.919
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 
 0.918
Sfla_4290
KEGG: sgr:SGR_4950 putative acetyltransferase.
   
 0.857
Sfla_4283
PFAM: glycosyl transferase family 2; KEGG: sgr:SGR_4943 putative glycosyl transferase.
 
  
 0.855
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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