STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_4412PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: sgr:SGR_5098 putative oxidoreductase. (339 aa)    
Predicted Functional Partners:
Sfla_4411
Regulatory protein MarR; KEGG: sgr:SGR_5097 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.763
Sfla_5139
PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_5811 putative phosphotransferase.
 
    0.637
Sfla_4423
KEGG: sgr:SGR_5100 putative integral membrane protein.
     
 0.547
Sfla_5138
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sgr:SGR_5810 putative acyl-CoA dehydrogenase.
  
 
  0.469
Sfla_3444
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cai:Caci_7251 alcohol dehydrogenase GroES domain protein.
 
  
 0.439
Sfla_0562
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ami:Amir_4178 alcohol dehydrogenase GroES domain protein.
 
  
 0.424
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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