STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_4666PFAM: aminotransferase class V; SirA-like domain-containing protein; KEGG: sgr:SGR_5351 putative pyridoxal-phosphate-dependent aminotransferase; Belongs to the sulfur carrier protein TusA family. (460 aa)    
Predicted Functional Partners:
Sfla_4903
SUF system FeS assembly protein, NifU family; KEGG: sgr:SGR_5600 putative nitrogen fixation protein NifU-related protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
  
 0.991
Sfla_2113
UBA/THIF-type NAD/FAD binding protein; KEGG: sgr:SGR_2347 molybdopterin biosynthesis-like protein MoeZ; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein.
   
 0.981
Sfla_3214
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: sgr:SGR_3737 putative phenylacetic acid degradation NADH oxidoreductase.
  
 0.925
Sfla_1850
PFAM: aminotransferase class V; KEGG: sgr:SGR_2029 putative pyridoxal-phosphate-dependent aminotransferase.
  
  
 
0.923
Sfla_1514
Rhodanese domain protein; KEGG: sgr:SGR_1678 putative thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
 0.916
Sfla_2882
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: sgr:SGR_3965 putative thiosulfate sulfurtransferase; SMART: Rhodanese domain protein.
  
 0.916
Sfla_3439
Rhodanese domain protein; KEGG: pin:Ping_0854 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
 0.916
Sfla_1994
KEGG: sgr:SGR_2207 hypothetical protein.
   
 0.868
Sfla_4662
KEGG: sgr:SGR_5347 hypothetical protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
 
  
 0.808
Sfla_4901
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: sgr:SGR_5598 putative ABC transporter ATP-binding protein; SMART: AAA ATPase.
  
 
 0.783
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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