STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_5759PFAM: HpcH/HpaI aldolase; KEGG: sgr:SGR_6525 hypothetical protein. (432 aa)    
Predicted Functional Partners:
Sfla_1054
KEGG: sgr:SGR_1311 putative OHCU decarboxylase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
 
     0.797
Sfla_1052
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.784
Sfla_2389
PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; KEGG: sgr:SGR_2686 putative OHCU decarboxylase.
 
     0.776
Sfla_1053
Hydroxyisourate hydrolase; KEGG: sgr:SGR_1310 hypothetical protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.758
Sfla_1028
Allantoinase; KEGG: sgr:SGR_1289 putative allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase.
 
    0.748
Sfla_1422
Allantoinase; KEGG: sgr:SGR_1289 putative allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase.
 
    0.748
Sfla_5758
KEGG: sma:SAV_1480 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
  
  
 0.740
Sfla_5757
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sgr:SGR_1208 putative electron transfer flavoprotein beta subunit.
  
    0.694
Sfla_4971
PFAM: class II aldolase/adducin family protein; KEGG: sgr:SGR_5648 putative aldolase.
   
    0.676
Sfla_5819
PFAM: class II aldolase/adducin family protein; KEGG: ami:Amir_3731 class II aldolase/adducin family protein.
   
    0.676
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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