Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD43592.1 | SDD43636.1 | SAMN05421538_101607 | SAMN05421538_101608 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Tryptophan-rich sensory protein. | 0.784 |
SDD43592.1 | SDD43790.1 | SAMN05421538_101607 | SAMN05421538_101611 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Hypothetical protein. | 0.535 |
SDD43592.1 | SDD77297.1 | SAMN05421538_101607 | SAMN05421538_102398 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Glyoxalase family protein. | 0.515 |
SDD43592.1 | SDE18574.1 | SAMN05421538_101607 | SAMN05421538_104258 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.501 |
SDD43592.1 | acpP | SAMN05421538_101607 | SAMN05421538_104132 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.803 |
SDD43592.1 | guaA | SAMN05421538_101607 | SAMN05421538_10483 | Proline iminopeptidase; Belongs to the peptidase S33 family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.561 |
SDD43592.1 | infB | SAMN05421538_101607 | SAMN05421538_101612 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.526 |
SDD43592.1 | nusA | SAMN05421538_101607 | SAMN05421538_101610 | Proline iminopeptidase; Belongs to the peptidase S33 family. | N utilization substance protein A; Participates in both transcription termination and antitermination. | 0.612 |
SDD43592.1 | rimP | SAMN05421538_101607 | SAMN05421538_101609 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.614 |
SDD43592.1 | ubiG | SAMN05421538_101607 | SAMN05421538_101606 | Proline iminopeptidase; Belongs to the peptidase S33 family. | 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.740 |
SDD43636.1 | SDD43592.1 | SAMN05421538_101608 | SAMN05421538_101607 | Tryptophan-rich sensory protein. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.784 |
SDD43636.1 | SDD43790.1 | SAMN05421538_101608 | SAMN05421538_101611 | Tryptophan-rich sensory protein. | Hypothetical protein. | 0.430 |
SDD43636.1 | infB | SAMN05421538_101608 | SAMN05421538_101612 | Tryptophan-rich sensory protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.430 |
SDD43636.1 | nusA | SAMN05421538_101608 | SAMN05421538_101610 | Tryptophan-rich sensory protein. | N utilization substance protein A; Participates in both transcription termination and antitermination. | 0.486 |
SDD43636.1 | rimP | SAMN05421538_101608 | SAMN05421538_101609 | Tryptophan-rich sensory protein. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.486 |
SDD43636.1 | ubiG | SAMN05421538_101608 | SAMN05421538_101606 | Tryptophan-rich sensory protein. | 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.564 |
SDD43790.1 | SDD43592.1 | SAMN05421538_101611 | SAMN05421538_101607 | Hypothetical protein. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.535 |
SDD43790.1 | SDD43636.1 | SAMN05421538_101611 | SAMN05421538_101608 | Hypothetical protein. | Tryptophan-rich sensory protein. | 0.430 |
SDD43790.1 | infB | SAMN05421538_101611 | SAMN05421538_101612 | Hypothetical protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.977 |
SDD43790.1 | nusA | SAMN05421538_101611 | SAMN05421538_101610 | Hypothetical protein. | N utilization substance protein A; Participates in both transcription termination and antitermination. | 0.977 |
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