Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD20134.1 | SDD47841.1 | SAMN05421538_10187 | SAMN05421538_101691 | Response regulator receiver domain-containing protein. | Flagellar hook protein FlgE. | 0.806 |
SDD20134.1 | SDD98267.1 | SAMN05421538_10187 | SAMN05421538_103174 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.836 |
SDD20134.1 | SDD98334.1 | SAMN05421538_10187 | SAMN05421538_103176 | Response regulator receiver domain-containing protein. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.964 |
SDD20134.1 | SDD98423.1 | SAMN05421538_10187 | SAMN05421538_103178 | Response regulator receiver domain-containing protein. | Flagellar motor switch protein FliN/FliY. | 0.973 |
SDD20134.1 | SDE25233.1 | SAMN05421538_10187 | SAMN05421538_10564 | Response regulator receiver domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.768 |
SDD20134.1 | SDE39960.1 | SAMN05421538_10187 | SAMN05421538_106134 | Response regulator receiver domain-containing protein. | Signal transduction histidine kinase. | 0.848 |
SDD20134.1 | SDE60317.1 | SAMN05421538_10187 | SAMN05421538_108134 | Response regulator receiver domain-containing protein. | Methyl-accepting chemotaxis protein. | 0.925 |
SDD20134.1 | SDE86393.1 | SAMN05421538_10187 | SAMN05421538_11318 | Response regulator receiver domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.835 |
SDD20134.1 | SDE92853.1 | SAMN05421538_10187 | SAMN05421538_11537 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.859 |
SDD20134.1 | flgH | SAMN05421538_10187 | SAMN05421538_106227 | Response regulator receiver domain-containing protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.796 |
SDD47841.1 | SDD20134.1 | SAMN05421538_101691 | SAMN05421538_10187 | Flagellar hook protein FlgE. | Response regulator receiver domain-containing protein. | 0.806 |
SDD47841.1 | SDD98267.1 | SAMN05421538_101691 | SAMN05421538_103174 | Flagellar hook protein FlgE. | Hypothetical protein. | 0.999 |
SDD47841.1 | SDD98334.1 | SAMN05421538_101691 | SAMN05421538_103176 | Flagellar hook protein FlgE. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
SDD47841.1 | SDD98423.1 | SAMN05421538_101691 | SAMN05421538_103178 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliN/FliY. | 0.995 |
SDD47841.1 | SDE39960.1 | SAMN05421538_101691 | SAMN05421538_106134 | Flagellar hook protein FlgE. | Signal transduction histidine kinase. | 0.651 |
SDD47841.1 | SDE60317.1 | SAMN05421538_101691 | SAMN05421538_108134 | Flagellar hook protein FlgE. | Methyl-accepting chemotaxis protein. | 0.604 |
SDD47841.1 | SDE86393.1 | SAMN05421538_101691 | SAMN05421538_11318 | Flagellar hook protein FlgE. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.513 |
SDD47841.1 | SDE92853.1 | SAMN05421538_101691 | SAMN05421538_11537 | Flagellar hook protein FlgE. | Hypothetical protein. | 0.487 |
SDD47841.1 | flgH | SAMN05421538_101691 | SAMN05421538_106227 | Flagellar hook protein FlgE. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.999 |
SDD98267.1 | SDD20134.1 | SAMN05421538_103174 | SAMN05421538_10187 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.836 |
page 1 of 5