STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD91123.1Luciferase family oxidoreductase, group 1. (338 aa)    
Predicted Functional Partners:
SDD49050.1
Cytochrome P450.
 
 
 0.728
SDD91077.1
Nucleoside-diphosphate-sugar epimerase.
    
  0.600
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
    
  0.585
SDE17197.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.546
SDE39068.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 
 0.433
SDE92278.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.433
SDD21649.1
Arsenical resistance protein ArsH.
   
  0.429
SDD34989.1
NAD(P)H-dependent FMN reductase.
   
  0.429
SDD43291.1
NAD(P)H-dependent FMN reductase.
   
  0.429
SDD77815.1
NAD(P)H-dependent FMN reductase.
   
  0.429
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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