Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDD19044.1 | SDD29054.1 | SAMN05421538_10159 | SAMN05421538_101295 | DNA polymerase-3 subunit delta'. | DNA polymerase III, chi subunit. | 0.996 |
| SDD19044.1 | SDD91668.1 | SAMN05421538_10159 | SAMN05421538_10323 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.997 |
| SDD19044.1 | SDD95411.1 | SAMN05421538_10159 | SAMN05421538_103106 | DNA polymerase-3 subunit delta'. | DNA polymerase III, delta subunit. | 0.998 |
| SDD19044.1 | SDE60870.1 | SAMN05421538_10159 | SAMN05421538_108150 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit alpha. | 0.993 |
| SDD19044.1 | dnaQ | SAMN05421538_10159 | SAMN05421538_101658 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.942 |
| SDD19044.1 | dnaX | SAMN05421538_10159 | SAMN05421538_105172 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.997 |
| SDD19044.1 | polA | SAMN05421538_10159 | SAMN05421538_10589 | DNA polymerase-3 subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.964 |
| SDD29054.1 | SDD19044.1 | SAMN05421538_101295 | SAMN05421538_10159 | DNA polymerase III, chi subunit. | DNA polymerase-3 subunit delta'. | 0.996 |
| SDD29054.1 | SDD91668.1 | SAMN05421538_101295 | SAMN05421538_10323 | DNA polymerase III, chi subunit. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.989 |
| SDD29054.1 | SDD95411.1 | SAMN05421538_101295 | SAMN05421538_103106 | DNA polymerase III, chi subunit. | DNA polymerase III, delta subunit. | 0.995 |
| SDD29054.1 | SDE60870.1 | SAMN05421538_101295 | SAMN05421538_108150 | DNA polymerase III, chi subunit. | DNA polymerase-3 subunit alpha. | 0.991 |
| SDD29054.1 | dnaQ | SAMN05421538_101295 | SAMN05421538_101658 | DNA polymerase III, chi subunit. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.948 |
| SDD29054.1 | dnaX | SAMN05421538_101295 | SAMN05421538_105172 | DNA polymerase III, chi subunit. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.995 |
| SDD29054.1 | polA | SAMN05421538_101295 | SAMN05421538_10589 | DNA polymerase III, chi subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.482 |
| SDD91668.1 | SDD19044.1 | SAMN05421538_10323 | SAMN05421538_10159 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase-3 subunit delta'. | 0.997 |
| SDD91668.1 | SDD29054.1 | SAMN05421538_10323 | SAMN05421538_101295 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III, chi subunit. | 0.989 |
| SDD91668.1 | SDD95411.1 | SAMN05421538_10323 | SAMN05421538_103106 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III, delta subunit. | 0.996 |
| SDD91668.1 | SDE60870.1 | SAMN05421538_10323 | SAMN05421538_108150 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase-3 subunit alpha. | 0.995 |
| SDD91668.1 | SDE87134.1 | SAMN05421538_10323 | SAMN05421538_11339 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Hypothetical protein. | 0.994 |
| SDD91668.1 | dnaA | SAMN05421538_10323 | SAMN05421538_10324 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.997 |
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