STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE13619.1Two-component system, cell cycle sensor histidine kinase and response regulator CckA. (687 aa)    
Predicted Functional Partners:
SDD69430.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.980
SDE60317.1
Methyl-accepting chemotaxis protein.
 
 0.979
SDE92853.1
Hypothetical protein.
  
 0.972
SDE09032.1
Histidine phosphotransferase ChpT.
   
 0.970
SDE39960.1
Signal transduction histidine kinase.
 
 
0.930
SDD28549.1
Hypothetical protein.
 
 0.920
SDE25337.1
Two-component system, cell cycle response regulator.
 
 0.906
SDE58463.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
0.904
SDD63455.1
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.895
SDD46080.1
Response regulator receiver domain-containing protein.
  
 0.892
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.