STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE15069.1Capsular polysaccharide transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
SDE15104.1
Capsular polysaccharide transport system permease protein.
 
 
 0.998
SDE42096.1
Capsular polysaccharide transport system permease protein.
 
 0.996
SDD97556.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 0.989
SDE41960.1
Capsular polysaccharide transport system permease protein.
 
 
 0.968
SDE42060.1
Capsule polysaccharide export protein KpsE/RkpR.
 
 
 0.947
SDD73511.1
Capsular polysaccharide export protein.
 
  
 0.932
SDD73552.1
Polysaccharide export outer membrane protein.
 
  
 0.889
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family.
  
    0.811
SDD73603.1
Capsular polysaccharide export protein.
 
   
 0.808
SDD97852.1
Glycosyl transferase family 2.
 
    0.782
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.