STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE29506.1Microcin C transport system substrate-binding protein. (658 aa)    
Predicted Functional Partners:
SDE29583.1
Microcin C transport system permease protein.
 
 
 0.933
SDE29546.1
Microcin C transport system permease protein.
 
  
 0.919
SDE29617.1
Microcin C transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.901
SDD23228.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.623
SDE29475.1
Cytochrome c.
       0.536
SDE29654.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.505
SDD67879.1
Peptide/nickel transport system substrate-binding protein.
   
 
  0.473
SDD61618.1
Dipeptide transport system substrate-binding protein.
   
 
  0.473
SDE02161.1
Peptide/nickel transport system substrate-binding protein.
   
 
  0.473
SDE38962.1
Peptide/nickel transport system substrate-binding protein.
   
 
  0.473
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.