STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE24040.1Glycosyl transferase family 2. (314 aa)    
Predicted Functional Partners:
SDE24000.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.846
SDE24169.1
Glycosyl transferase family 2.
 
  
  0.682
SDE24079.1
Glycosyl transferase family 2.
 
    
0.602
SDE39310.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
    0.553
SDD77178.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
    0.549
SDE24115.1
Chain length determinant protein.
 
  
 0.540
SDE24235.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
    0.533
SDD38257.1
Sugar transferase.
  
    0.525
SDD49050.1
Cytochrome P450.
    
  0.509
SDE42194.1
Hypothetical protein.
 
 
0.478
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.