STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE25822.1Response regulator receiver domain-containing protein. (124 aa)    
Predicted Functional Partners:
SDD74145.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
 0.965
SDE92853.1
Hypothetical protein.
 
 0.958
SDE25851.1
DNA polymerase-3 subunit epsilon.
 
 0.917
SDE60317.1
Methyl-accepting chemotaxis protein.
  
 0.839
SDD95057.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  
  0.832
SDD25441.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
  
  
 
0.823
SDE25779.1
Hypothetical protein.
 
    0.821
SDE25743.1
CBS domain-containing protein.
 
    0.817
SDD38038.1
Regulatory protein, luxR family.
  
 
  0.802
SDE13619.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 0.802
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.