STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE23128.1N-acetylmuramic acid 6-phosphate etherase. (293 aa)    
Predicted Functional Partners:
SDE22987.1
N-acetylglucosamine-6-phosphate deacetylase.
  
 0.995
SDE70823.1
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
 0.949
SDE23094.1
Glucosamine kinase.
 
 0.945
SDE23163.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
     0.879
SDE23231.1
Raffinose/stachyose/melibiose transport system permease protein.
 
     0.791
SDE23060.1
GntR family transcriptional regulator.
 
     0.774
SDE23021.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
 
     0.758
SDE23199.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.741
SDE48275.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
  
 0.714
SDE23267.1
Predicted dehydrogenase.
 
     0.657
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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