Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD42704.1 | SDD44158.1 | SAMN05421538_101589 | SAMN05421538_101618 | 4-hydroxyphenylpyruvate dioxygenase. | Fumarylacetoacetase. | 0.811 |
SDD42704.1 | SDE03648.1 | SAMN05421538_101589 | SAMN05421538_103305 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.983 |
SDD42704.1 | SDE42963.1 | SAMN05421538_101589 | SAMN05421538_106214 | 4-hydroxyphenylpyruvate dioxygenase. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.721 |
SDD42704.1 | SDE64246.1 | SAMN05421538_101589 | SAMN05421538_10910 | 4-hydroxyphenylpyruvate dioxygenase. | Aromatic-amino-acid transaminase. | 0.936 |
SDD42704.1 | SDE99042.1 | SAMN05421538_101589 | SAMN05421538_1214 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.990 |
SDD44158.1 | SDD42704.1 | SAMN05421538_101618 | SAMN05421538_101589 | Fumarylacetoacetase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.811 |
SDD44158.1 | SDE03648.1 | SAMN05421538_101618 | SAMN05421538_103305 | Fumarylacetoacetase. | Homogentisate 1,2-dioxygenase. | 0.953 |
SDD44158.1 | SDE42963.1 | SAMN05421538_101618 | SAMN05421538_106214 | Fumarylacetoacetase. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.506 |
SDD44158.1 | SDE99042.1 | SAMN05421538_101618 | SAMN05421538_1214 | Fumarylacetoacetase. | Homogentisate 1,2-dioxygenase. | 0.952 |
SDE03648.1 | SDD42704.1 | SAMN05421538_103305 | SAMN05421538_101589 | Homogentisate 1,2-dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.983 |
SDE03648.1 | SDD44158.1 | SAMN05421538_103305 | SAMN05421538_101618 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetase. | 0.953 |
SDE03648.1 | SDE42963.1 | SAMN05421538_103305 | SAMN05421538_106214 | Homogentisate 1,2-dioxygenase. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.483 |
SDE42872.1 | SDE42905.1 | SAMN05421538_106211 | SAMN05421538_106212 | Predicted amidophosphoribosyltransferases. | Hypothetical protein. | 0.700 |
SDE42872.1 | SDE42963.1 | SAMN05421538_106211 | SAMN05421538_106214 | Predicted amidophosphoribosyltransferases. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.492 |
SDE42872.1 | hemH | SAMN05421538_106211 | SAMN05421538_106213 | Predicted amidophosphoribosyltransferases. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.698 |
SDE42905.1 | SDE42872.1 | SAMN05421538_106212 | SAMN05421538_106211 | Hypothetical protein. | Predicted amidophosphoribosyltransferases. | 0.700 |
SDE42905.1 | SDE42963.1 | SAMN05421538_106212 | SAMN05421538_106214 | Hypothetical protein. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.524 |
SDE42905.1 | hemH | SAMN05421538_106212 | SAMN05421538_106213 | Hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.872 |
SDE42963.1 | SDD42704.1 | SAMN05421538_106214 | SAMN05421538_101589 | 4a-hydroxytetrahydrobiopterin dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.721 |
SDE42963.1 | SDD44158.1 | SAMN05421538_106214 | SAMN05421538_101618 | 4a-hydroxytetrahydrobiopterin dehydratase. | Fumarylacetoacetase. | 0.506 |
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