Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD81425.1 | SDE12330.1 | SAMN05421538_102493 | SAMN05421538_10490 | Hypothetical protein. | Dihydroneopterin aldolase. | 0.479 |
SDD81425.1 | SDE16639.1 | SAMN05421538_102493 | SAMN05421538_104208 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SDD81425.1 | SDE64210.1 | SAMN05421538_102493 | SAMN05421538_1099 | Hypothetical protein. | Hypothetical protein. | 0.767 |
SDD81425.1 | SDE71518.1 | SAMN05421538_102493 | SAMN05421538_11027 | Hypothetical protein. | Hypothetical protein. | 0.772 |
SDD81425.1 | folE2 | SAMN05421538_102493 | SAMN05421538_10627 | Hypothetical protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.615 |
SDE12296.1 | SDE12330.1 | SAMN05421538_10489 | SAMN05421538_10490 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | Dihydroneopterin aldolase. | 0.999 |
SDE12296.1 | folE2 | SAMN05421538_10489 | SAMN05421538_10627 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.588 |
SDE12296.1 | ribA | SAMN05421538_10489 | SAMN05421538_10399 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.645 |
SDE12296.1 | ribB | SAMN05421538_10489 | SAMN05421538_102375 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.630 |
SDE12330.1 | SDD81425.1 | SAMN05421538_10490 | SAMN05421538_102493 | Dihydroneopterin aldolase. | Hypothetical protein. | 0.479 |
SDE12330.1 | SDE12296.1 | SAMN05421538_10490 | SAMN05421538_10489 | Dihydroneopterin aldolase. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.999 |
SDE12330.1 | SDE64210.1 | SAMN05421538_10490 | SAMN05421538_1099 | Dihydroneopterin aldolase. | Hypothetical protein. | 0.454 |
SDE12330.1 | folE2 | SAMN05421538_10490 | SAMN05421538_10627 | Dihydroneopterin aldolase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.700 |
SDE12330.1 | ribA | SAMN05421538_10490 | SAMN05421538_10399 | Dihydroneopterin aldolase. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.434 |
SDE12330.1 | ribB | SAMN05421538_10490 | SAMN05421538_102375 | Dihydroneopterin aldolase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.434 |
SDE16639.1 | SDD81425.1 | SAMN05421538_104208 | SAMN05421538_102493 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SDE16639.1 | SDE64210.1 | SAMN05421538_104208 | SAMN05421538_1099 | Hypothetical protein. | Hypothetical protein. | 0.770 |
SDE16639.1 | SDE71518.1 | SAMN05421538_104208 | SAMN05421538_11027 | Hypothetical protein. | Hypothetical protein. | 0.772 |
SDE16639.1 | folE2 | SAMN05421538_104208 | SAMN05421538_10627 | Hypothetical protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.610 |
SDE56786.1 | folE2 | SAMN05421538_10831 | SAMN05421538_10627 | Pyruvate kinase; Belongs to the pyruvate kinase family. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.923 |
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