Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD95411.1 | SDD96388.1 | SAMN05421538_103106 | SAMN05421538_103130 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.704 |
SDD95411.1 | SDE14861.1 | SAMN05421538_103106 | SAMN05421538_104158 | DNA polymerase III, delta subunit. | Rod shape-determining protein MreC. | 0.403 |
SDD95411.1 | SDE66440.1 | SAMN05421538_103106 | SAMN05421538_10962 | DNA polymerase III, delta subunit. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.770 |
SDD96388.1 | SDD95411.1 | SAMN05421538_103130 | SAMN05421538_103106 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.704 |
SDD96388.1 | SDE14861.1 | SAMN05421538_103130 | SAMN05421538_104158 | Hypothetical protein. | Rod shape-determining protein MreC. | 0.474 |
SDD96388.1 | SDE66440.1 | SAMN05421538_103130 | SAMN05421538_10962 | Hypothetical protein. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.764 |
SDE14834.1 | SDE14861.1 | SAMN05421538_104157 | SAMN05421538_104158 | Rod shape-determining protein MreB. | Rod shape-determining protein MreC. | 0.998 |
SDE14834.1 | SDE66440.1 | SAMN05421538_104157 | SAMN05421538_10962 | Rod shape-determining protein MreB. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.965 |
SDE14861.1 | SDD95411.1 | SAMN05421538_104158 | SAMN05421538_103106 | Rod shape-determining protein MreC. | DNA polymerase III, delta subunit. | 0.403 |
SDE14861.1 | SDD96388.1 | SAMN05421538_104158 | SAMN05421538_103130 | Rod shape-determining protein MreC. | Hypothetical protein. | 0.474 |
SDE14861.1 | SDE14834.1 | SAMN05421538_104158 | SAMN05421538_104157 | Rod shape-determining protein MreC. | Rod shape-determining protein MreB. | 0.998 |
SDE14861.1 | SDE38551.1 | SAMN05421538_104158 | SAMN05421538_10693 | Rod shape-determining protein MreC. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.446 |
SDE14861.1 | SDE66440.1 | SAMN05421538_104158 | SAMN05421538_10962 | Rod shape-determining protein MreC. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.796 |
SDE38551.1 | SDE14861.1 | SAMN05421538_10693 | SAMN05421538_104158 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Rod shape-determining protein MreC. | 0.446 |
SDE38551.1 | SDE66440.1 | SAMN05421538_10693 | SAMN05421538_10962 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.843 |
SDE66440.1 | SDD95411.1 | SAMN05421538_10962 | SAMN05421538_103106 | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | DNA polymerase III, delta subunit. | 0.770 |
SDE66440.1 | SDD96388.1 | SAMN05421538_10962 | SAMN05421538_103130 | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | Hypothetical protein. | 0.764 |
SDE66440.1 | SDE14834.1 | SAMN05421538_10962 | SAMN05421538_104157 | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | Rod shape-determining protein MreB. | 0.965 |
SDE66440.1 | SDE14861.1 | SAMN05421538_10962 | SAMN05421538_104158 | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | Rod shape-determining protein MreC. | 0.796 |
SDE66440.1 | SDE38551.1 | SAMN05421538_10962 | SAMN05421538_10693 | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.843 |
page 1 of 3