STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE67941.1Phage major capsid protein, HK97 family. (387 aa)    
Predicted Functional Partners:
SDE67970.1
Hypothetical protein.
  
 0.995
SDE68040.1
Phage portal protein, HK97 family.
 
 
 
 0.994
SDE67871.1
Phage head-tail joining protein.
 
 
 0.994
SDE67901.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
   0.993
SDE67662.1
TIGR02217 family protein.
 
 
   0.992
SDE67796.1
Phage major tail protein, TP901-1 family.
 
   0.992
SDE67838.1
Protein of unknown function.
 
 
   0.992
SDE67618.1
Phage conserved hypothetical protein BR0599.
 
 
   0.991
SDE67698.1
Phage tail tape measure protein, lambda family.
 
    0.925
SDE67761.1
Phage tail tube protein, GTA-gp10.
 
     0.925
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.