Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD20047.1 | SDE39345.1 | SAMN05421538_10185 | SAMN05421538_106118 | Uncharacterized protein involved in cysteine biosynthesis. | Nucleotide-binding universal stress protein, UspA family. | 0.508 |
SDD20047.1 | SDE71373.1 | SAMN05421538_10185 | SAMN05421538_11023 | Uncharacterized protein involved in cysteine biosynthesis. | Conserved hypothetical protein. | 0.548 |
SDE16486.1 | SDE39345.1 | SAMN05421538_104204 | SAMN05421538_106118 | BMFP domain-containing protein YqiC. | Nucleotide-binding universal stress protein, UspA family. | 0.499 |
SDE16486.1 | SDE71373.1 | SAMN05421538_104204 | SAMN05421538_11023 | BMFP domain-containing protein YqiC. | Conserved hypothetical protein. | 0.573 |
SDE39345.1 | SDD20047.1 | SAMN05421538_106118 | SAMN05421538_10185 | Nucleotide-binding universal stress protein, UspA family. | Uncharacterized protein involved in cysteine biosynthesis. | 0.508 |
SDE39345.1 | SDE16486.1 | SAMN05421538_106118 | SAMN05421538_104204 | Nucleotide-binding universal stress protein, UspA family. | BMFP domain-containing protein YqiC. | 0.499 |
SDE39345.1 | SDE71341.1 | SAMN05421538_106118 | SAMN05421538_11022 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.782 |
SDE39345.1 | SDE71373.1 | SAMN05421538_106118 | SAMN05421538_11023 | Nucleotide-binding universal stress protein, UspA family. | Conserved hypothetical protein. | 0.790 |
SDE57934.1 | SDE71373.1 | SAMN05421538_10863 | SAMN05421538_11023 | Hypothetical protein. | Conserved hypothetical protein. | 0.583 |
SDE71341.1 | SDE39345.1 | SAMN05421538_11022 | SAMN05421538_106118 | Hypothetical protein. | Nucleotide-binding universal stress protein, UspA family. | 0.782 |
SDE71341.1 | SDE71373.1 | SAMN05421538_11022 | SAMN05421538_11023 | Hypothetical protein. | Conserved hypothetical protein. | 0.968 |
SDE71341.1 | SDE71407.1 | SAMN05421538_11022 | SAMN05421538_11024 | Hypothetical protein. | ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily B, MsbA. | 0.628 |
SDE71341.1 | SDE71444.1 | SAMN05421538_11022 | SAMN05421538_11025 | Hypothetical protein. | Hypothetical protein; Belongs to the GcvT family. | 0.628 |
SDE71341.1 | dinB | SAMN05421538_11022 | SAMN05421538_11026 | Hypothetical protein. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.628 |
SDE71341.1 | pcm | SAMN05421538_11022 | SAMN05421538_11020 | Hypothetical protein. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.537 |
SDE71341.1 | surE | SAMN05421538_11022 | SAMN05421538_11021 | Hypothetical protein. | 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.537 |
SDE71373.1 | SDD20047.1 | SAMN05421538_11023 | SAMN05421538_10185 | Conserved hypothetical protein. | Uncharacterized protein involved in cysteine biosynthesis. | 0.548 |
SDE71373.1 | SDE16486.1 | SAMN05421538_11023 | SAMN05421538_104204 | Conserved hypothetical protein. | BMFP domain-containing protein YqiC. | 0.573 |
SDE71373.1 | SDE39345.1 | SAMN05421538_11023 | SAMN05421538_106118 | Conserved hypothetical protein. | Nucleotide-binding universal stress protein, UspA family. | 0.790 |
SDE71373.1 | SDE57934.1 | SAMN05421538_11023 | SAMN05421538_10863 | Conserved hypothetical protein. | Hypothetical protein. | 0.583 |
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