STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE76366.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SDE76299.1
Type IV secretion system protein VirB2.
 
     0.924
SDE76408.1
Hypothetical protein.
 
     0.890
SDE76262.1
Type IV secretion system protein VirB3.
 
     0.889
SDE76125.1
Type IV secretion system protein VirB5.
 
     0.883
SDE75890.1
Hypothetical protein.
 
     0.880
SDE76232.1
Type IV secretion system protein VirB4.
 
     0.876
SDE75854.1
Type IV secretion system protein VirB6.
 
     0.875
SDE76088.1
Type IV secretion system protein VirB8.
 
     0.875
SDE75936.1
Protein of unknown function.
 
     0.874
SDE76003.1
Type IV secretion system protein VirB10.
 
     0.873
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.