Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE77050.1 | SDE77089.1 | SAMN05421538_11137 | SAMN05421538_11138 | Protein SCO1/2. | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | 0.910 |
SDE77050.1 | SDE77123.1 | SAMN05421538_11137 | SAMN05421538_11139 | Protein SCO1/2. | Thioredoxin. | 0.900 |
SDE77050.1 | SDE77156.1 | SAMN05421538_11137 | SAMN05421538_11140 | Protein SCO1/2. | Hypothetical protein. | 0.930 |
SDE77050.1 | SDE77191.1 | SAMN05421538_11137 | SAMN05421538_11141 | Protein SCO1/2. | Protein SCO1/2. | 0.723 |
SDE77050.1 | SDE77222.1 | SAMN05421538_11137 | SAMN05421538_11142 | Protein SCO1/2. | Peptidase family M23. | 0.847 |
SDE77050.1 | SDE77259.1 | SAMN05421538_11137 | SAMN05421538_11143 | Protein SCO1/2. | Uncharacterized conserved protein. | 0.790 |
SDE77050.1 | SDE77290.1 | SAMN05421538_11137 | SAMN05421538_11144 | Protein SCO1/2. | Zinc transporter, ZIP family. | 0.641 |
SDE77050.1 | SDE77952.1 | SAMN05421538_11137 | SAMN05421538_11159 | Protein SCO1/2. | Hypothetical protein. | 0.746 |
SDE77050.1 | lnt-2 | SAMN05421538_11137 | SAMN05421538_11146 | Protein SCO1/2. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.637 |
SDE77050.1 | lspA-3 | SAMN05421538_11137 | SAMN05421538_11145 | Protein SCO1/2. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.708 |
SDE77089.1 | SDE77050.1 | SAMN05421538_11138 | SAMN05421538_11137 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Protein SCO1/2. | 0.910 |
SDE77089.1 | SDE77123.1 | SAMN05421538_11138 | SAMN05421538_11139 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Thioredoxin. | 0.979 |
SDE77089.1 | SDE77156.1 | SAMN05421538_11138 | SAMN05421538_11140 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Hypothetical protein. | 0.904 |
SDE77089.1 | SDE77191.1 | SAMN05421538_11138 | SAMN05421538_11141 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Protein SCO1/2. | 0.916 |
SDE77089.1 | SDE77222.1 | SAMN05421538_11138 | SAMN05421538_11142 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Peptidase family M23. | 0.924 |
SDE77089.1 | SDE77259.1 | SAMN05421538_11138 | SAMN05421538_11143 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Uncharacterized conserved protein. | 0.842 |
SDE77089.1 | SDE77290.1 | SAMN05421538_11138 | SAMN05421538_11144 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Zinc transporter, ZIP family. | 0.786 |
SDE77089.1 | lnt-2 | SAMN05421538_11138 | SAMN05421538_11146 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.740 |
SDE77089.1 | lspA-3 | SAMN05421538_11138 | SAMN05421538_11145 | Disulfide bond formation protein DsbB; Belongs to the DsbB family. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.807 |
SDE77123.1 | SDE77050.1 | SAMN05421538_11139 | SAMN05421538_11137 | Thioredoxin. | Protein SCO1/2. | 0.900 |
page 1 of 5