STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE78133.1Thiol-disulfide isomerase or thioredoxin. (174 aa)    
Predicted Functional Partners:
SDE78102.1
Hypothetical protein.
 
     0.878
SDE78165.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
 
    
0.841
SDE78203.1
Cytochrome c, mono-and diheme variants.
   
   0.835
SDE77835.1
Cytochrome c-type biogenesis protein.
 
    0.828
SDE77920.1
Hypothetical protein.
 
     0.747
SDE36021.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
 
   
 0.725
SDE78065.1
Hypothetical protein.
       0.722
SDE77952.1
Hypothetical protein.
 
     0.678
SDE77993.1
Protein SCO1/2.
 
     0.675
SDE76749.1
Cytochrome c-type biogenesis protein.
 
    0.669
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.