Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD92988.1 | SDD93075.1 | SAMN05421538_10352 | SAMN05421538_10354 | Peptidoglycan-associated lipoprotein. | Hypothetical protein. | 0.877 |
SDD92988.1 | SDE47529.1 | SAMN05421538_10352 | SAMN05421538_10714 | Peptidoglycan-associated lipoprotein. | Type VI secretion system protein ImpK. | 0.738 |
SDD92988.1 | SDE87590.1 | SAMN05421538_10352 | SAMN05421538_11353 | Peptidoglycan-associated lipoprotein. | Biopolymer transport protein ExbD. | 0.789 |
SDD92988.1 | SDE87630.1 | SAMN05421538_10352 | SAMN05421538_11354 | Peptidoglycan-associated lipoprotein. | Biopolymer transport protein ExbB. | 0.843 |
SDD92988.1 | tolB | SAMN05421538_10352 | SAMN05421538_10353 | Peptidoglycan-associated lipoprotein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.987 |
SDD92988.1 | tolQ | SAMN05421538_10352 | SAMN05421538_10356 | Peptidoglycan-associated lipoprotein. | Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.961 |
SDD93075.1 | SDD92988.1 | SAMN05421538_10354 | SAMN05421538_10352 | Hypothetical protein. | Peptidoglycan-associated lipoprotein. | 0.877 |
SDD93075.1 | SDE87590.1 | SAMN05421538_10354 | SAMN05421538_11353 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.938 |
SDD93075.1 | SDE87630.1 | SAMN05421538_10354 | SAMN05421538_11354 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.844 |
SDD93075.1 | tolB | SAMN05421538_10354 | SAMN05421538_10353 | Hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.941 |
SDD93075.1 | tolQ | SAMN05421538_10354 | SAMN05421538_10356 | Hypothetical protein. | Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.963 |
SDE47529.1 | SDD92988.1 | SAMN05421538_10714 | SAMN05421538_10352 | Type VI secretion system protein ImpK. | Peptidoglycan-associated lipoprotein. | 0.738 |
SDE47529.1 | SDE87561.1 | SAMN05421538_10714 | SAMN05421538_11352 | Type VI secretion system protein ImpK. | Protein TonB. | 0.423 |
SDE47529.1 | SDE87590.1 | SAMN05421538_10714 | SAMN05421538_11353 | Type VI secretion system protein ImpK. | Biopolymer transport protein ExbD. | 0.502 |
SDE87530.1 | SDE87561.1 | SAMN05421538_11351 | SAMN05421538_11352 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Protein TonB. | 0.848 |
SDE87530.1 | SDE87590.1 | SAMN05421538_11351 | SAMN05421538_11353 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Biopolymer transport protein ExbD. | 0.624 |
SDE87530.1 | SDE87630.1 | SAMN05421538_11351 | SAMN05421538_11354 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Biopolymer transport protein ExbB. | 0.632 |
SDE87561.1 | SDE47529.1 | SAMN05421538_11352 | SAMN05421538_10714 | Protein TonB. | Type VI secretion system protein ImpK. | 0.423 |
SDE87561.1 | SDE87530.1 | SAMN05421538_11352 | SAMN05421538_11351 | Protein TonB. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.848 |
SDE87561.1 | SDE87590.1 | SAMN05421538_11352 | SAMN05421538_11353 | Protein TonB. | Biopolymer transport protein ExbD. | 0.984 |
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