STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE94147.1TRAP transporter, DctM subunit. (431 aa)    
Predicted Functional Partners:
SDE94090.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
  0.988
SDE94117.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.786
SDD34614.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
    0.780
SDD30207.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.777
SDE51950.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.776
SDD70883.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.759
SDD30252.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.758
SDE70717.1
Tripartite ATP-independent transporter, DctM component.
  
     0.733
SDD64294.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.695
SDE94174.1
2,4-dienoyl-CoA reductase.
       0.631
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.