STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE93647.1General L-amino acid transport system ATP-binding protein. (249 aa)    
Predicted Functional Partners:
SDE93677.1
General L-amino acid transport system permease protein.
 
 0.991
SDE93702.1
General L-amino acid transport system permease protein/general L-amino acid transport system permease protein.
 
 
 0.981
SDE93733.1
General L-amino acid transport system substrate-binding protein.
 
 0.968
SDD61149.1
General L-amino acid transport system permease protein.
 
 0.966
SDE50062.1
Polar amino acid transport system permease protein.
 0.960
SDE50102.1
Polar amino acid transport system permease protein.
 
 0.953
SDD61053.1
General L-amino acid transport system substrate-binding protein.
 
 0.949
SDD61101.1
General L-amino acid transport system permease protein.
 
 
 0.925
SDE41403.1
Polar amino acid transport system permease protein.
 
 0.919
SDE41485.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.904
Your Current Organism:
Paracoccus isoporae
NCBI taxonomy Id: 591205
Other names: BCRC 17967, DSM 22220, LMG 25205, LMG:25205, P. isoporae, Paracoccus isoporae Chen et al. 2011, Paracoccus sp. sw-3, strain SW-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.