STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB3LIM domain binding 3. (735 aa)    
Predicted Functional Partners:
EHBP1
EH domain binding protein 1.
   
 0.799
EHBP1L1
EH domain binding protein 1 like 1.
   
 0.799
SMTN
Smoothelin.
   
 
 0.765
PDLIM2
PDZ and LIM domain 2.
     
0.756
SMTNL1
Smoothelin like 1.
   
 
 0.754
PDLIM3
PDZ and LIM domain 3.
     
0.750
MYO18B
Myosin XVIIIB.
   
 0.746
SMTNL2
Smoothelin like 2.
     
 0.744
ENSPTEP00000031029
annotation not available
     
 0.739
PDLIM1
PDZ and LIM domain 1.
     
0.739
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.