STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIG3DNA ligase 3. (1010 aa)    
Predicted Functional Partners:
XRCC1
X-ray repair cross complementing 1.
   
 0.996
XRCC5
X-ray repair cross complementing 5.
   
 0.979
PNKP
Polynucleotide kinase 3'-phosphatase.
   
 0.955
POLB
DNA polymerase beta.
  
 0.934
PCNA
Proliferating cell nuclear antigen.
   
 0.933
ENSPTEP00000008987
annotation not available
   
 0.933
ENSPTEP00000009295
annotation not available
   
 0.933
TDP1
tyrosyl-DNA phosphodiesterase 1.
   
 
 0.915
ENSPTEP00000009743
annotation not available
   
 0.911
ENSPTEP00000012842
annotation not available
   
 0.911
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.