STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF11SR-related CTD associated factor 11. (1464 aa)    
Predicted Functional Partners:
NIPBL
NIPBL cohesin loading factor.
   
  
 0.853
THOC2
THO complex 2.
   
    0.849
ATRX
ATRX chromatin remodeler.
   
    0.772
BCLAF1
BCL2 associated transcription factor 1.
  
    0.752
STAG2
Stromal antigen 2.
   
    0.748
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.746
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
   
    0.742
PHIP
Pleckstrin homology domain interacting protein.
   
    0.739
PBRM1
Polybromo 1.
   
    0.731
RSF1
Remodeling and spacing factor 1.
   
    0.728
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.