STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88CCoiled-coil domain containing 88C. (2032 aa)    
Predicted Functional Partners:
DVL1
Dishevelled segment polarity protein 1.
    
 0.680
GNAI1
G protein subunit alpha i1.
    
 
 0.606
GNAI3
G protein subunit alpha i3.
    
 
 0.606
GNAI2
G protein subunit alpha i2.
    
 
 0.584
ENSPTEP00000021324
annotation not available
    
 
 0.568
RND1
Rho family GTPase 1.
    
  0.524
RND3
Rho family GTPase 3.
    
  0.524
NUDT2
Nudix hydrolase 2.
      
 0.482
GNA12
G protein subunit alpha 12.
    
 
 0.463
GNAT1
G protein subunit alpha transducin 1.
    
 
 0.453
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.