STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD6Chromodomain helicase DNA binding protein 6. (2715 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.928
SSRP1
Structure specific recognition protein 1.
    
 0.869
INO80C
INO80 complex subunit C.
    
 0.853
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.847
TRRAP
Transformation/transcription domain associated protein.
   
 0.840
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.831
ENSPTEP00000036814
annotation not available
    
 0.831
RUVBL2
RuvB like AAA ATPase 2.
    
 0.831
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.825
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.799
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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