STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGB1High mobility group box 1. (215 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 
 0.912
RAG1
Recombination activating 1.
    
 
 0.797
HMGB4
High mobility group box 4.
  
0.795
HMGB2
High mobility group box 2.
  
0.791
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.723
GTF2H1
General transcription factor IIH subunit 1.
    
 0.721
GTF2H3
General transcription factor IIH subunit 3.
    
 0.712
ACTR8
Actin related protein 8.
    
 0.706
TLR4
Toll like receptor 4.
   
 0.694
LY96
Lymphocyte antigen 96.
   
 0.690
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.