STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM130Transmembrane protein 130. (435 aa)    
Predicted Functional Partners:
SMPD1
Sphingomyelin phosphodiesterase 1.
   
 
 0.689
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.681
GALC
Galactosylceramidase.
     
 0.675
ASAH1
N-acylsphingosine amidohydrolase 1.
   
 
 0.655
PSAPL1
Prosaposin like 1 (gene/pseudogene).
   
 0.600
ENSPTEP00000035689
annotation not available
   
 0.600
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.586
CERK
Ceramide kinase.
    
 0.574
GAK
Cyclin G associated kinase.
   
 
 0.573
ACER1
Alkaline ceramidase 1.
     
 0.566
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.